Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23268 : MC1R

Your submitted sequence: sequence (317 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.8	-0.736E+02	0.262	0.328	0.592	1GZM_A	1.20.1070.10.6.1
2	pgenthreader.5	72.757	0.272	0.321	0.515	1U19_A	1.20.1070.10.6.1
3	ffas.10	-0.708E+02	0.294	0.356	0.604	2KS9_A	N/A
4	pgenthreader.1	86.060	0.263	0.310	0.498	2KS9_A	N/A
5	rpsblast.10	8e-09	0.141	0.158	0.224	2KS9_A	N/A
6	pgenthreader.8	70.506	0.327	0.360	0.493	2RH1_A	N/A
7	ffas.4	-0.919E+02	0.294	0.357	0.608	2Y00_A	N/A
8	ffas.2	-0.925E+02	0.262	0.335	0.627	2YDO_A	N/A
9	ffas.20	-0.631E+02	0.274	0.345	0.631	2Z73_A	N/A
10	rpsblast.6	1e-09	0.136	0.154	0.224	2Z73_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.