Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23267 : PIPK_3

Your submitted sequence: sequence (391 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.118E+03	0.177	0.248	0.530	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
2	pgenthreader.1	122.319	0.164	0.244	0.566	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
3	rpsblast.2	3e-77	0.175	0.245	0.523	1BO1_B	3.30.800.10.1.1 3.30.810.10.1.1
4	pgenthreader.5	32.455	0.051	0.087	0.231	1OPK_A	2.30.30.40.9.1 3.30.505.10.5.1 3.30.200.20.10.1 1.10.510.10.13.1
5	rpsblast.7	0.025	0.004	0.005	0.011	1QZV_U	N/A
6	ffas.9	-0.685E+01	0.042	0.051	0.085	1W2F_A	N/A
7	ffas.10	-0.673E+01	0.013	0.013	0.011	1Z1M_A	1.10.245.10.1.1
8	ffas.2	-0.113E+03	0.142	0.190	0.383	2GK9_A	3.30.800.10.1.1
9	pgenthreader.3	88.219	0.124	0.163	0.317	2GK9_A	3.30.800.10.1.1
10	rpsblast.3	8e-76	0.140	0.177	0.323	2GK9_B	3.30.800.10.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.