Pcons.net Protein Structure Prediction Meta Server Wednesday, August 21 2019
Main Menu
Submission
Queue
About Pcons
About Pmodeller
About Pcons.net
Database status
Download




© Arne Elofsson

SciLifeLab Logotype nbis Logotype
SeRC Logotype Stockholm University logotype EGI logotype
23267 : PIPK_3

Your submitted sequence: sequence (391 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.3
-0.109E+030.1790.2730.647 2YBX_AN/A
2
rpsblast.1
3e-780.1780.2520.546 2YBX_AN/A
3
pgenthreader.2
116.6030.1700.2500.569 2YBX_AN/A
4
ffas.1
-0.118E+030.1770.2480.530 1BO1_A3.30.800.10.1.1 3.30.810.10.1.1
5
rpsblast.2
3e-770.1750.2450.523 1BO1_B3.30.800.10.1.1 3.30.810.10.1.1
6
pgenthreader.1
122.3190.1640.2440.566 1BO1_A3.30.800.10.1.1 3.30.810.10.1.1
7
ffas.2
-0.113E+030.1420.1900.383 2GK9_A3.30.800.10.1.1
8
rpsblast.3
8e-760.1400.1770.323 2GK9_B3.30.800.10.1.1
9
pgenthreader.3
88.2190.1240.1630.317 2GK9_A3.30.800.10.1.1
10
pgenthreader.5
32.4550.0510.0870.231 1OPK_A2.30.30.40.9.1 3.30.505.10.5.1 3.30.200.20.10.1 1.10.510.10.13.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center