Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23260 : GeneX

Your submitted sequence: sequence (389 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.10	-0.740E+01	0.015	0.017	0.027	1DDF_A	N/A
2	ffas.5	-0.807E+01	0.016	0.019	0.031	1ICH_A	1.10.533.10.11.1
3	ffas.1	-0.884E+01	0.016	0.017	0.019	1NGR_A	N/A
4	ffas.7	-0.778E+01	0.007	0.014	0.044	1NKN_A	N/A
5	ffas.8	-0.773E+01	0.015	0.016	0.020	1WXP_A	N/A
6	rpsblast.7	3.8	0.006	0.009	0.019	1Z5Z_A	N/A
7	pgenthreader.7	42.797	0.018	0.040	0.130	2AVT_A	N/A
8	pgenthreader.5	42.876	0.022	0.055	0.189	2B5E_A	N/A
9	ffas.3	-0.827E+01	0.019	0.034	0.092	2E31_A	N/A
10	ffas.4	-0.814E+01	0.014	0.015	0.020	2IB1_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.