Pcons.net Protein Structure Prediction

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Friday, April 26 2024

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23256 : Pcons

Your submitted sequence: sequence (190 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.5	-0.652E+01	0.015	0.046	0.168	1AL0_1	1.10.1850.10.1.1 1.10.1850.10.1.1 1.10.1850.10.1.1 1.10.1850.10.1.1 2.60.169.10.1.1 2.60.120.20.25.2
2	ffas.1	-0.202E+02	0.009	0.010	0.015	1CWX_A	4.10.710.10.1.1
3	rpsblast.7	0.93	0.008	0.010	0.018	1PC6_B	N/A
4	rpsblast.6	0.47	0.010	0.017	0.046	1QZV_U	N/A
5	pgenthreader.4	29.523	0.007	0.036	0.151	1UB1_A	3.30.890.10.2.1
6	pgenthreader.1	57.041	0.005	0.015	0.056	1XCQ_Q	N/A
7	pgenthreader.2	13.000	0.004	0.003	-0.002	1XCT_P	N/A
8	pgenthreader.3	13.000	0.001	0.010	0.047	1XCT_P	N/A
9	rpsblast.1	1e-16	0.011	0.007	-0.011	1XF5_P	N/A
10	ffas.4	-0.654E+01	0.013	0.039	0.143	2KR6_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.