Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

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Submission

23252 : long_arfip

Your submitted sequence: sequence (373 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	98.875	0.227	0.234	0.264	1I4D_A	1.20.1270.60.1.1
2	ffas.1	-0.537E+02	0.225	0.233	0.264	1I49_A	1.20.1270.60.1.1
3	ffas.3	-0.453E+02	0.230	0.230	0.231	4A3A_A	N/A
4	rpsblast.1	6e-27	0.216	0.226	0.264	1I4D_A	1.20.1270.60.1.1
5	ffas.2	-0.467E+02	0.226	0.221	0.200	1URU_A	N/A
6	pgenthreader.2	70.651	0.211	0.220	0.257	4AVM_A	N/A
7	ffas.4	-0.449E+02	0.219	0.219	0.219	2FIC_A	N/A
8	rpsblast.3	6e-24	0.212	0.217	0.236	4ATM_A	N/A
9	rpsblast.7	6e-17	0.211	0.215	0.233	1X04_A	N/A
10	pgenthreader.4	67.628	0.210	0.213	0.227	1URU_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.