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© Arne Elofsson

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23246 : id:23245:1-149

Your submitted sequence: sequence (149 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
blast.1
2.10.0270.007-0.072 1IHG_A2.40.100.10.1.2 1.25.40.10.2.1
2
ffas.9
-0.655E+010.0510.0740.165 1ITP_A3.30.70.80.1.1
3
blast.7
190.0170.0140.000 1JGC_A1.20.1260.10.10.2
4
rpsblast.10
140.0080.0130.031 1NZ0_D3.30.230.10.1.1
5
rpsblast.1
0.0010.0240.016-0.015 1QZV_UN/A
6
pgenthreader.1
26.0870.0520.0930.256 1R6V_AN/A
7
ffas.5
-0.939E+010.0510.0650.121 1SCJ_B3.30.70.80.2.1
8
pgenthreader.4
24.4120.0640.0860.173 1SCJ_B3.30.70.80.2.1
9
ffas.4
-0.121E+020.0450.0580.108 1SPB_P3.30.70.80.2.1
10
pgenthreader.2
24.5460.0650.1000.240 1SPB_P3.30.70.80.2.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center