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Arne Elofsson
23245 : S1P 1r6v.1.A
Your submitted sequence:
sequence (428 aa)
Ready methods:
PCONS
PMODELLER
blast
ffas
pgenthreader
rpsblast
Queued locally:
lomets itasser
rpsblast
Rank
Model
Method Score
Pcons
Pcomb
ProQ2
ProQ / ProQresSum
Template
CATH
Alignment
1
3e-46
0.078
0.073
0.055
3LXU_X
N/A
2
3e-44
0.150
0.169
0.245
3ZXY_A
N/A
3
6e-43
0.361
0.364
0.375
1GCI_A
N/A
4
5e-42
0.227
0.233
0.257
3D43_B
N/A
5
6e-40
0.235
0.244
0.282
1DBI_A
3.40.50.200.1.4
6
4e-39
0.281
0.295
0.350
2B6N_A
3.40.50.200.2.2
7
3e-37
0.391
0.385
0.361
1THM_A
N/A
8
5e-36
0.157
0.177
0.258
4H6W_B
N/A
9
6e-36
0.203
0.213
0.253
2PWA_A
N/A
References
Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [
LINK
]
© 2006 Stockholm University, Stockholm Bioinformatics Center