Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23245 : S1P 1r6v.1.A

Your submitted sequence: sequence (428 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.690E+02	0.308	0.340	0.467	1A2Q_A	N/A
2	ffas.13	-0.690E+02	0.249	0.275	0.380	1AH2_A	N/A
3	ffas.12	-0.690E+02	0.309	0.341	0.467	1AQN_A	N/A
4	ffas.2	-0.696E+02	0.307	0.337	0.459	1BH6_A	3.40.50.200.1.3
5	ffas.8	-0.690E+02	0.306	0.331	0.430	1C9J_A	3.40.50.200.1.1
6	ffas.5	-0.691E+02	0.308	0.327	0.401	1C9M_A	3.40.50.200.1.1
7	rpsblast.5	6e-40	0.235	0.244	0.282	1DBI_A	3.40.50.200.1.4
8	ffas.10	-0.690E+02	0.303	0.328	0.426	1DUI_A	3.40.50.200.1.3
9	pgenthreader.10	17.365	0.000	0.013	0.066	1GCI_A	N/A
10	pgenthreader.9	17.365	0.389	0.388	0.384	1GCI_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.