Pcons.net Protein Structure Prediction

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Friday, April 26 2024

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Submission

23244 : T0870-D1

Your submitted sequence: sequence (123 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.3	-0.632E+01	0.054	0.062	0.094	1GZU_A	3.40.50.620.9.2
2	pgenthreader.6	31.446	0.081	0.147	0.409	1JUQ_A	1.25.40.90.3.1
3	blast.6	5.6	0.036	0.008	-0.104	1NM8_A	N/A
4	ffas.6	-0.551E+01	0.052	0.055	0.066	1NUP_A	3.40.50.620.9.1
5	rpsblast.9	4.1	0.083	0.074	0.040	1PP9_A	3.30.830.10.3.1 3.30.830.10.2.1
6	rpsblast.6	1.3	0.063	0.034	-0.080	1Q2L_A	N/A
7	blast.7	5.7	0.056	0.023	-0.111	1SIQ_A	1.10.540.10.5.1 2.40.110.10.3.1 1.20.140.10.3.1
8	ffas.2	-0.665E+01	0.057	0.072	0.132	1TR8_A	N/A
9	ffas.8	-0.530E+01	0.051	0.055	0.071	1Z1V_A	1.10.150.50.8.1
10	ffas.7	-0.541E+01	0.056	0.063	0.090	2E8M_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.