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© Arne Elofsson

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23239 : Ataxin 7 wild type and mutant

Your submitted sequence: sequence (705 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser

PMODELLER (only used 38 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
blast.7
650.0000.0010.006 1KN3_A3.90.280.10.2.1
2
pgenthreader.10
33.0660.0030.0120.050 1N7D_AN/A
3
ffas.10
-0.711E+010.0030.0150.063 1OFW_A3.90.10.10.12.2 3.90.10.10.9.1
4
pgenthreader.2
59.7740.0060.0360.154 1S58_A2.170.30.10.3.1
5
ffas.7
-0.745E+010.0030.0070.021 1ZR9_AN/A
6
ffas.9
-0.732E+010.0040.0080.026 2CKL_BN/A
7
ffas.8
-0.742E+010.0030.0070.024 2CT5_AN/A
8
blast.5
400.0040.0050.008 2EN7_AN/A
9
pgenthreader.1
61.2470.0060.0560.254 2INY_AN/A
10
blast.1
5e-440.0130.0180.039 2KKR_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center