Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23236 : Atxn 7 wild type and mutant type

Your submitted sequence: sequence (789 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 37 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.9	87	0.001	0.002	0.004	1KN3_A	3.90.280.10.2.1
2	pgenthreader.10	18.770	0.002	0.028	0.130	1N7D_A	N/A
3	pgenthreader.6	56.647	0.005	0.034	0.151	1S58_A	2.170.30.10.3.1
4	blast.6	64	0.002	0.001	-0.004	2EHE_A	N/A
5	blast.5	47	0.002	0.003	0.005	2EN7_A	N/A
6	pgenthreader.1	62.825	0.006	0.047	0.211	2INY_A	N/A
7	blast.1	9e-44	0.011	0.016	0.034	2KKR_A	N/A
8	ffas.1	-0.381E+02	0.011	0.016	0.034	2KKR_A	N/A
9	pgenthreader.4	15.499	0.011	0.016	0.034	2KKR_A	N/A
10	pgenthreader.5	15.499	0.001	0.004	0.018	2KKR_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.