Pcons.net Protein Structure Prediction Meta Server Friday, June 21 2019
Main Menu
Submission
Queue
About Pcons
About Pmodeller
About Pcons.net
Database status
Download




© Arne Elofsson

SciLifeLab Logotype nbis Logotype
SeRC Logotype Stockholm University logotype EGI logotype
23235 : LOV2

Your submitted sequence: sequence (143 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 37 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.9
-0.684E+010.0320.0420.084 1ADQ_A2.60.40.10.29.1 2.60.40.10.18.1
2
ffas.10
-0.680E+010.0370.0490.096 1AO7_B2.60.40.10.1.1
3
rpsblast.7
8.10.0230.0220.019 1FYX_A3.40.50.10140.1.2
4
ffas.2
-0.762E+010.0350.0430.075 1G84_A2.60.40.10.113.1
5
blast.8
5.70.0200.008-0.040 1JMU_B3.90.1370.10.1.1 1.10.2040.10.1.1 1.10.2050.10.1.1 2.60.120.420.1.1
6
pgenthreader.6
30.2070.0430.0840.247 1KAE_A3.40.50.1980.11.1 3.40.50.10270.1.1
7
pgenthreader.1
31.5480.0370.0770.237 1KON_A1.10.10.200.3.1 3.30.1270.10.1.2 3.30.70.980.3.1
8
pgenthreader.7
30.1370.0360.0360.034 1LFP_A1.10.10.200.1.2 3.30.1270.10.1.1 3.30.70.980.1.1
9
ffas.4
-0.696E+010.0330.0450.095 1PY4_A2.60.40.10.1.1
10
rpsblast.4
4.30.0310.016-0.044 1X9D_A1.50.10.50.2.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center