Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23235 : LOV2

Your submitted sequence: sequence (143 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 37 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.684E+01	0.032	0.042	0.084	1ADQ_A	2.60.40.10.29.1 2.60.40.10.18.1
2	ffas.10	-0.680E+01	0.037	0.049	0.096	1AO7_B	2.60.40.10.1.1
3	rpsblast.7	8.1	0.023	0.022	0.019	1FYX_A	3.40.50.10140.1.2
4	ffas.2	-0.762E+01	0.035	0.043	0.075	1G84_A	2.60.40.10.113.1
5	blast.8	5.7	0.020	0.008	-0.040	1JMU_B	3.90.1370.10.1.1 1.10.2040.10.1.1 1.10.2050.10.1.1 2.60.120.420.1.1
6	pgenthreader.6	30.207	0.043	0.084	0.247	1KAE_A	3.40.50.1980.11.1 3.40.50.10270.1.1
7	pgenthreader.1	31.548	0.037	0.077	0.237	1KON_A	1.10.10.200.3.1 3.30.1270.10.1.2 3.30.70.980.3.1
8	pgenthreader.7	30.137	0.036	0.036	0.034	1LFP_A	1.10.10.200.1.2 3.30.1270.10.1.1 3.30.70.980.1.1
9	ffas.4	-0.696E+01	0.033	0.045	0.095	1PY4_A	2.60.40.10.1.1
10	rpsblast.4	4.3	0.031	0.016	-0.044	1X9D_A	1.50.10.50.2.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.