Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

Main Menu

Submission

23235 : LOV2

Your submitted sequence: sequence (143 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 37 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.4	31.069	0.045	0.097	0.304	4AT7_B	N/A
2	pgenthreader.5	30.268	0.043	0.085	0.251	4LU0_A	N/A
3	pgenthreader.6	30.207	0.043	0.084	0.247	1KAE_A	3.40.50.1980.11.1 3.40.50.10270.1.1
4	rpsblast.2	1.1	0.055	0.082	0.191	3CF4_G	N/A
5	pgenthreader.1	31.548	0.037	0.077	0.237	1KON_A	1.10.10.200.3.1 3.30.1270.10.1.2 3.30.70.980.3.1
6	pgenthreader.3	31.168	0.046	0.075	0.193	2YX0_A	N/A
7	pgenthreader.9	29.381	0.039	0.071	0.197	3KO1_A	N/A
8	pgenthreader.10	29.146	0.042	0.068	0.170	3FFM_A	N/A
9	ffas.3	-0.734E+01	0.038	0.063	0.164	2EIF_A	2.30.30.30.2.2 2.40.50.140.38.2
10	pgenthreader.8	29.774	0.041	0.062	0.144	2VO1_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.