Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

Main Menu

Submission

23233 : SP|Q8N6M3|FITM2_HUMAN FAT STORAGE-INDUCING TRANSMEMBRANE PROTEIN 2 OS=HOMO SAPIENS OX=9606 GN=FITM2 PE=1 SV=1

Your submitted sequence: sequence (262 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.7	-0.724E+01	0.045	0.137	0.505	3UG9_A	N/A
2	pgenthreader.1	30.513	0.039	0.134	0.515	4ENE_A	N/A
3	pgenthreader.2	30.393	0.044	0.133	0.491	3CX5_C	N/A
4	pgenthreader.9	28.830	0.039	0.131	0.497	4FDD_A	N/A
5	pgenthreader.3	30.120	0.040	0.130	0.490	2NYF_A	N/A
6	ffas.9	-0.713E+01	0.047	0.121	0.417	3DDL_A	N/A
7	rpsblast.4	0.16	0.047	0.121	0.416	1UP8_A	1.10.606.10.3.1
8	pgenthreader.10	28.414	0.038	0.120	0.450	3TGU_C	N/A
9	rpsblast.3	0.14	0.057	0.119	0.368	1QI9_A	1.10.606.10.1.1
10	pgenthreader.4	30.034	0.040	0.118	0.432	3D9S_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.