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© Arne Elofsson

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23233 : SP|Q8N6M3|FITM2_HUMAN FAT STORAGE-INDUCING TRANSMEMBRANE PROTEIN 2 OS=HOMO SAPIENS OX=9606 GN=FITM2 PE=1 SV=1

Your submitted sequence: sequence (262 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.7
-0.724E+010.0450.1370.505 3UG9_AN/A
2
pgenthreader.1
30.5130.0390.1340.515 4ENE_AN/A
3
pgenthreader.2
30.3930.0440.1330.491 3CX5_CN/A
4
pgenthreader.9
28.8300.0390.1310.497 4FDD_AN/A
5
pgenthreader.3
30.1200.0400.1300.490 2NYF_AN/A
6
ffas.9
-0.713E+010.0470.1210.417 3DDL_AN/A
7
rpsblast.4
0.160.0470.1210.416 1UP8_A1.10.606.10.3.1
8
pgenthreader.10
28.4140.0380.1200.450 3TGU_CN/A
9
rpsblast.3
0.140.0570.1190.368 1QI9_A1.10.606.10.1.1
10
pgenthreader.4
30.0340.0400.1180.432 3D9S_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center