Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23231 : id:23230:1-257,403-646

Your submitted sequence: sequence (501 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 48 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.486E+02	0.146	0.147	0.152	1AGR_E	1.10.196.10.2.2 1.10.167.10.3.1
2	ffas.19	-0.431E+02	0.129	0.129	0.130	1CMZ_A	1.10.196.10.2.3 1.10.167.10.3.2
3	blast.1	5e-05	0.127	0.131	0.145	1DK8_A	1.10.196.10.1.1 1.10.167.10.1.1
4	ffas.11	-0.440E+02	0.131	0.136	0.154	1DK8_A	1.10.196.10.1.1 1.10.167.10.1.1
5	pgenthreader.10	64.860	0.144	0.146	0.153	1DK8_A	1.10.196.10.1.1 1.10.167.10.1.1
6	rpsblast.2	5e-17	0.137	0.134	0.123	1DK8_A	1.10.196.10.1.1 1.10.167.10.1.1
7	ffas.3	-0.459E+02	0.117	0.123	0.149	1EZT_A	1.10.196.10.2.2 1.10.167.10.3.1
8	rpsblast.5	3e-16	0.083	0.093	0.133	1HTJ_F	N/A
9	blast.5	0.93	0.025	0.029	0.047	1IYX_B	3.30.390.10.2.2 3.20.20.120.6.3
10	blast.8	2.7	0.000	-0.000	-0.001	1PKP_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.