Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23228 : id:23227:250-449

Your submitted sequence: sequence (200 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 38 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.8	81	0.016	0.016	0.014	1E5P_A	2.40.128.20.11.1
2	pgenthreader.2	29.282	0.034	0.089	0.307	1EJ6_B	N/A
3	pgenthreader.4	28.561	0.036	0.100	0.355	1EJ6_C	N/A
4	pgenthreader.8	27.448	0.036	0.093	0.320	2D4X_A	N/A
5	pgenthreader.7	27.635	0.032	0.044	0.093	2FTU_A	N/A
6	ffas.2	-0.622E+01	0.028	0.040	0.088	2IAI_A	N/A
7	ffas.5	-0.597E+01	0.029	0.039	0.080	2PBX_A	N/A
8	ffas.4	-0.599E+01	0.031	0.046	0.106	2ZCX_A	N/A
9	pgenthreader.10	27.114	0.038	0.104	0.368	3CTK_A	N/A
10	ffas.9	-0.578E+01	0.029	0.037	0.067	3DCF_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.