Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23227 : WT

Your submitted sequence: sequence (449 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.5	36.598	0.021	0.089	0.361	1EJ6_B	N/A
2	ffas.4	-0.860E+01	0.018	0.098	0.417	1JPW_A	1.25.10.10.1.1
3	blast.5	25	0.006	0.006	0.005	1W5R_A	N/A
4	ffas.7	-0.804E+01	0.018	0.097	0.411	1WA5_B	1.25.10.10.2.1
5	ffas.8	-0.799E+01	0.017	0.093	0.395	2C1T_A	1.25.10.10.2.1
6	pgenthreader.8	33.825	0.019	0.043	0.139	2C3F_A	N/A
7	pgenthreader.10	16.068	0.000	0.005	0.023	2CP6_A	N/A
8	pgenthreader.9	16.068	0.006	0.015	0.053	2CP6_A	N/A
9	pgenthreader.1	39.160	0.018	0.048	0.168	2KR0_A	N/A
10	pgenthreader.2	22.077	0.015	0.034	0.112	2NYY_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.