Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23226 : id:23225:1-142

Your submitted sequence: sequence (142 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.2	2e-23	0.314	0.319	0.338	1EYV_A	1.10.940.10.3.1
2	ffas.4	-0.718E+02	0.372	0.428	0.654	1EYV_A	1.10.940.10.3.1
3	pgenthreader.4	86.636	0.370	0.423	0.635	1EYV_A	1.10.940.10.3.1
4	rpsblast.3	1e-30	0.362	0.406	0.584	1EYV_A	1.10.940.10.3.1
5	pgenthreader.8	33.996	0.123	0.166	0.336	1HLV_A	1.10.10.60.16.1 1.10.10.60.19.1
6	ffas.10	-0.664E+01	0.110	0.162	0.371	1NF4_A	1.20.1260.10.9.1
7	ffas.5	-0.651E+02	0.286	0.339	0.553	1Q8C_A	1.10.940.10.4.1
8	pgenthreader.5	62.104	0.236	0.298	0.547	1Q8C_A	1.10.940.10.4.1
9	rpsblast.5	1e-27	0.295	0.344	0.538	1Q8C_A	1.10.940.10.4.1
10	ffas.6	-0.261E+02	0.336	0.399	0.650	1SQF_A	1.10.940.10.2.1 1.10.287.730.1.1 3.30.70.1170.1.1 3.40.50.150.7.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.