Pcons.net Protein Structure Prediction

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Thursday, April 25 2024

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Submission

23226 : id:23225:1-142

Your submitted sequence: sequence (142 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.1	3e-88	0.430	0.488	0.722	1TZV_A	1.10.940.10.1.1
2	ffas.1	-0.801E+02	0.407	0.479	0.769	1TZT_A	1.10.940.10.1.1
3	pgenthreader.1	140.966	0.405	0.478	0.771	1TZV_A	1.10.940.10.1.1
4	rpsblast.1	3e-36	0.411	0.476	0.737	1TZV_A	1.10.940.10.1.1
5	pgenthreader.3	88.120	0.392	0.465	0.759	3R2C_A	N/A
6	rpsblast.4	4e-29	0.399	0.465	0.731	3R2C_B	N/A
7	rpsblast.2	1e-31	0.409	0.465	0.687	3D3B_A	N/A
8	ffas.2	-0.749E+02	0.383	0.456	0.747	3R2D_A	N/A
9	ffas.3	-0.723E+02	0.387	0.454	0.722	3D3B_A	N/A
10	pgenthreader.2	98.350	0.387	0.452	0.710	3D3B_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.