Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23216 :

Your submitted sequence: sequence (273 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.3	-0.568E+01	0.014	0.009	-0.010	1FJE_B	3.30.70.330.29.1 3.30.70.330.26.1
2	pgenthreader.3	36.119	0.021	0.057	0.203	1GYC_A	2.60.40.420.11.2 2.60.40.420.27.2 2.60.40.420.29.3
3	ffas.8	-0.532E+01	0.006	0.004	-0.004	1JSU_C	4.10.365.10.1.1
4	rpsblast.8	25	0.009	0.006	-0.008	1LLP_A	N/A
5	rpsblast.10	33	0.000	-0.000	-0.002	1P7A_A	N/A
6	rpsblast.5	2.9	0.012	0.006	-0.016	1QZV_U	N/A
7	ffas.2	-0.593E+01	0.008	0.007	0.004	1WD2_A	N/A
8	pgenthreader.10	34.380	0.018	0.044	0.148	1YHP_A	N/A
9	blast.2	1.8	0.008	0.004	-0.010	1ZB1_A	N/A
10	ffas.7	-0.539E+01	0.013	0.010	0.000	2DGW_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.