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© Arne Elofsson

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23214 : AK2_I.ric

Your submitted sequence: sequence (253 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 48 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
blast.1
1e-950.4130.4410.553 1AK2_AN/A
2
ffas.8
-0.100E+030.4270.4880.730 1AK2_AN/A
3
pgenthreader.1
130.0300.4300.4860.712 1AK2_AN/A
4
ffas.12
-0.959E+020.5420.5540.603 1AKE_A3.40.50.300.11.2
5
ffas.11
-0.983E+020.5830.6030.683 1AKY_AN/A
6
pgenthreader.8
121.3000.5720.5940.681 1AKY_AN/A
7
rpsblast.3
4e-530.5820.5970.658 1AKY_AN/A
8
ffas.4
-0.100E+030.5790.5880.626 1P3J_A3.40.50.300.9.1
9
ffas.3
-0.100E+030.5830.5960.648 1S3G_A3.40.50.300.9.1
10
pgenthreader.6
122.3730.5790.5920.645 1S3G_A3.40.50.300.9.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center