Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

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Submission

23210 : id:23209:1-32,296-758

Your submitted sequence: sequence (495 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser hhpred2

PCONS (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.1	5e-40	0.027	0.099	0.388	5J6Q_A	N/A
2	blast.2	1e-16	0.025	0.077	0.287	5J72_A	N/A
3	pgenthreader.1	50.569	0.019	0.070	0.274	2R60_A	N/A
4	pgenthreader.6	47.015	0.021	0.070	0.265	4N7B_A	N/A
5	pgenthreader.5	47.560	0.019	0.060	0.224	2JJM_A	N/A
6	ffas.8	-0.468E+01	0.020	0.060	0.218	1F0K_A	3.40.50.2000.10.1 3.40.50.2000.9.1
7	ffas.2	-0.557E+01	0.023	0.059	0.202	2JLC_A	N/A
8	pgenthreader.7	46.620	0.019	0.059	0.217	1USG_A	3.40.50.9600.1.1 3.40.50.2300.4.1
9	pgenthreader.4	48.598	0.019	0.058	0.215	1Z15_A	3.40.50.9600.1.1 3.40.50.2300.4.1
10	blast.3	9e-12	0.021	0.054	0.187	5J6Q_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.