Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23194 : id:23193:1-149,226-409

Your submitted sequence: sequence (333 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.1	1e-127	0.121	0.175	0.389	3NCX_A	N/A
2	pgenthreader.1	15.982	0.122	0.174	0.380	3NCX_A	N/A
3	blast.3	2e-55	0.117	0.165	0.356	1F00_I	2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
4	ffas.2	-0.349E+02	0.103	0.164	0.406	1F00_I	2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
5	pgenthreader.4	20.013	0.104	0.160	0.386	1F00_I	2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
6	ffas.1	-0.506E+02	0.105	0.160	0.379	2ZQK_A	N/A
7	rpsblast.5	0.052	0.115	0.155	0.316	1F00_I	2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
8	rpsblast.1	3e-10	0.105	0.146	0.311	3NCX_A	N/A
9	pgenthreader.6	59.001	0.023	0.071	0.264	2ZXQ_A	N/A
10	pgenthreader.10	52.569	0.025	0.069	0.243	3QC5_X	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.