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© Arne Elofsson

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23193 : id:23192:71-479

Your submitted sequence: sequence (409 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.4
-0.112E+020.0150.0300.091 1CWV_A2.60.40.920.1.2 2.60.40.920.2.1 2.60.40.920.3.1 2.60.40.1080.2.1 3.10.100.10.27.1
2
blast.3
2e-560.0940.1330.287 1F00_I2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
3
ffas.2
-0.379E+020.0810.1370.363 1F00_I2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
4
pgenthreader.3
20.1000.0810.0910.129 1F00_I2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
5
pgenthreader.4
20.1000.0010.0080.036 1F00_I2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
6
rpsblast.10
0.680.0900.1270.277 1F00_I2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
7
blast.5
4e-130.0130.0170.033 1F02_T4.10.820.10.1.1
8
pgenthreader.7
48.5020.0180.0220.038 1F02_T4.10.820.10.1.1
9
rpsblast.2
1e-240.0170.0210.037 1F02_T4.10.820.10.1.1
10
ffas.5
-0.100E+020.0190.0260.053 1F1S_A2.70.98.10.4.2 1.50.10.100.2.2 2.60.220.10.5.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center