Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23190 :

Your submitted sequence: sequence (446 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 48 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.18	-0.991E+02	0.402	0.423	0.506	1CDK_A	1.10.510.10.1.1 3.30.200.20.31.1
2	ffas.11	-0.100E+03	0.340	0.366	0.472	1FOT_A	1.10.510.10.1.3 3.30.200.20.31.2
3	ffas.4	-0.104E+03	0.343	0.364	0.450	1MRV_A	1.10.510.10.5.1 3.30.200.20.5.3
4	blast.2	0.0	0.450	0.459	0.493	1O6L_A	1.10.510.10.5.1 3.30.200.20.34.1
5	pgenthreader.4	16.182	0.479	0.482	0.496	1O6L_A	1.10.510.10.5.1 3.30.200.20.34.1
6	pgenthreader.5	16.182	0.000	-0.004	-0.018	1O6L_A	1.10.510.10.5.1 3.30.200.20.34.1
7	rpsblast.3	1e-154	0.469	0.474	0.493	1O6L_A	1.10.510.10.5.1 3.30.200.20.34.1
8	pgenthreader.6	231.007	0.463	0.470	0.498	1RDQ_E	1.10.510.10.1.1 3.30.200.20.31.1
9	ffas.17	-0.992E+02	0.415	0.436	0.522	1SMH_A	1.10.510.10.1.1 3.30.200.20.31.1
10	blast.9	1e-94	0.316	0.345	0.463	1XJD_A	3.30.200.20.5.2 1.10.510.10.5.3

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.