Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 23 2024

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Submission

23185 : vacleish2

Your submitted sequence: sequence (288 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 36 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.1	1e-09	0.051	0.057	0.081	1CTF_A	N/A
2	pgenthreader.3	16.660	0.073	0.084	0.127	1CTF_A	N/A
3	pgenthreader.4	16.660	0.008	0.009	0.011	1CTF_A	N/A
4	rpsblast.5	3e-23	0.070	0.081	0.127	1CTF_A	N/A
5	ffas.3	-0.410E+02	0.081	0.111	0.230	1DD3_A	N/A
6	pgenthreader.1	88.995	0.085	0.116	0.239	1DD3_A	N/A
7	blast.3	4.3	0.004	0.008	0.022	1LML_A	N/A
8	pgenthreader.7	19.079	0.024	0.083	0.319	1RKT_A	1.10.357.10.4.1
9	pgenthreader.8	19.079	0.007	0.008	0.014	1RKT_A	1.10.357.10.4.1
10	pgenthreader.2	80.687	0.069	0.100	0.222	1RQU_A	1.20.5.710.1.1 3.30.1390.10.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.