Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23184 : id:23183:1-138

Your submitted sequence: sequence (138 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 34 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.8	43	0.000	0.004	0.020	16VP_A	1.10.1290.10.1.1
2	rpsblast.1	2e-11	0.019	0.081	0.327	1M1J_A	1.20.5.50.14.1
3	rpsblast.4	4e-10	0.014	0.079	0.337	1M1J_A	1.20.5.50.14.1
4	ffas.8	-0.162E+02	0.006	0.035	0.153	1NAY_A	1.20.5.320.1.2
5	pgenthreader.7	18.140	0.015	0.038	0.132	1NAY_A	1.20.5.320.1.2
6	pgenthreader.8	18.140	0.013	0.028	0.089	1NAY_A	1.20.5.320.1.2
7	ffas.9	-0.118E+02	0.016	0.036	0.115	1O91_A	2.60.120.40.7.1
8	pgenthreader.5	34.970	0.016	0.031	0.091	1QSU_A	N/A
9	pgenthreader.6	34.970	0.019	0.038	0.113	1QSU_A	N/A
10	ffas.1	-0.343E+02	0.017	0.042	0.142	1WCK_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.