Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23172 : phf11d

Your submitted sequence: sequence (337 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.9	29.166	0.015	0.040	0.141	1BGX_T	3.40.50.1010.7.1 1.10.150.20.8.1 3.30.420.10.8.1 1.20.1060.10.1.3 3.30.70.370.1.3 1.10.150.20.18.2
2	ffas.6	-0.142E+02	0.020	0.033	0.087	1FS9_A	N/A
3	pgenthreader.6	29.413	0.015	0.025	0.067	1KI0_A	2.40.20.10.1.4 2.40.20.10.1.5 2.40.20.10.1.3
4	pgenthreader.1	14.263	0.005	0.019	0.074	1M1J_A	1.20.5.50.14.1
5	pgenthreader.2	14.263	0.003	0.008	0.026	1M1J_A	1.20.5.50.14.1
6	pgenthreader.8	29.180	0.012	0.018	0.042	1N7D_A	N/A
7	ffas.11	-0.126E+02	0.025	0.043	0.117	1RUT_X	N/A
8	pgenthreader.7	29.392	0.006	0.032	0.137	1RW2_A	1.25.40.240.1.1
9	ffas.7	-0.135E+02	0.013	0.020	0.046	1SP3_A	N/A
10	rpsblast.8	0.74	0.037	0.042	0.060	1WEW_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.