Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23172 : phf11d

Your submitted sequence: sequence (337 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.1	6e-23	0.051	0.085	0.220	4NN2_B	N/A
2	rpsblast.1	4e-18	0.047	0.076	0.194	4NN2_A	N/A
3	pgenthreader.3	31.920	0.053	0.060	0.086	2LQ6_A	N/A
4	pgenthreader.5	29.686	0.022	0.057	0.196	3SXQ_A	N/A
5	rpsblast.2	4e-13	0.043	0.051	0.084	2LQ6_A	N/A
6	blast.5	5.5	0.046	0.049	0.061	2LQ6_A	N/A
7	ffas.19	-0.120E+02	0.038	0.049	0.092	2XB1_A	N/A
8	ffas.4	-0.152E+02	0.038	0.049	0.091	2LBM_A	N/A
9	ffas.8	-0.135E+02	0.033	0.048	0.107	2YSM_A	N/A
10	ffas.13	-0.124E+02	0.025	0.048	0.138	2DFY_X	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.