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© Arne Elofsson

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23171 : HumanHN1

Your submitted sequence: sequence (154 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 37 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.3
-0.908E+010.0260.1070.430 1I3Q_AN/A
2
pgenthreader.9
29.9410.0210.0750.292 1IZL_BN/A
3
pgenthreader.2
33.4910.0160.1050.460 1MV3_AN/A
4
blast.7
260.0160.0200.036 1NO7_AN/A
5
rpsblast.8
2.50.0160.0280.076 1OE4_B3.40.470.10.3.1
6
rpsblast.6
0.700.0130.0450.172 1PK8_B3.30.1490.20.8.1 3.40.50.20.3.1 3.30.470.20.9.1
7
pgenthreader.7
14.2950.0260.0890.339 1R5S_AN/A
8
pgenthreader.8
14.2950.0120.0240.072 1R5S_AN/A
9
pgenthreader.6
30.1970.0210.1100.465 1S58_A2.170.30.10.3.1
10
pgenthreader.10
19.0000.0230.0910.361 1UB1_A3.30.890.10.2.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center