Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23170 : XP_0049

Your submitted sequence: sequence (294 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.797E+02	0.218	0.328	0.766	1JQD_A	3.40.50.150.43.1
2	ffas.14	-0.304E+02	0.181	0.217	0.362	1VL5_A	3.40.50.150.17.1
3	pgenthreader.6	68.338	0.212	0.235	0.326	1VL5_A	3.40.50.150.17.1
4	rpsblast.5	0.008	0.133	0.140	0.169	1VL5_C	3.40.50.150.17.1
5	ffas.2	-0.342E+02	0.155	0.167	0.217	1VLM_A	3.40.50.150.27.1
6	blast.3	2.0	0.131	0.132	0.134	1VLM_B	3.40.50.150.27.1
7	ffas.13	-0.305E+02	0.144	0.162	0.233	1XTP_A	N/A
8	pgenthreader.2	71.739	0.197	0.229	0.357	1XXL_A	3.40.50.150.26.1
9	pgenthreader.1	162.890	0.235	0.338	0.751	2AOT_A	3.40.50.150.43.1
10	blast.1	1e-105	0.269	0.364	0.745	2AOT_B	3.40.50.150.43.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.