Pcons.net Protein Structure Prediction

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Friday, April 19 2024

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Submission

23169 : SINV_nsP1

Your submitted sequence: sequence (540 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	44.928	0.013	0.046	0.177	4GLX_A	N/A
2	pgenthreader.3	39.236	0.010	0.040	0.161	2Y24_A	N/A
3	pgenthreader.6	35.861	0.011	0.033	0.122	2C78_A	3.40.50.300.5.1 2.40.30.10.7.1 2.40.30.10.4.1
4	pgenthreader.4	37.950	0.012	0.032	0.113	2VD8_A	N/A
5	pgenthreader.9	35.314	0.012	0.029	0.096	3FJO_A	N/A
6	pgenthreader.10	35.084	0.011	0.026	0.088	1PE9_A	2.160.20.10.2.1
7	ffas.1	-0.737E+01	0.010	0.025	0.087	1MVH_A	2.170.270.10.2.2
8	ffas.7	-0.585E+01	0.014	0.025	0.071	1FFY_A	N/A
9	ffas.2	-0.613E+01	0.010	0.021	0.064	3BO5_A	N/A
10	rpsblast.3	2e-04	0.010	0.018	0.049	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.