Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23163 : MPP2——p

Your submitted sequence: sequence (552 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.2	-0.888E+02	0.095	0.148	0.361	3UAT_A	N/A
2	ffas.3	-0.888E+02	0.095	0.144	0.341	2XKX_A	N/A
3	pgenthreader.1	15.791	0.095	0.137	0.304	1KJW_A	2.30.30.40.22.1 3.40.50.300.119.1 3.30.63.10.1.2
4	rpsblast.4	7e-47	0.103	0.136	0.269	3TVT_A	N/A
5	pgenthreader.4	15.639	0.101	0.135	0.273	3UAT_A	N/A
6	pgenthreader.8	98.255	0.097	0.133	0.275	3TVT_A	N/A
7	ffas.1	-0.899E+02	0.090	0.130	0.292	1JXM_A	2.30.30.40.22.1 3.40.50.300.119.1 3.30.63.10.1.2
8	ffas.12	-0.667E+02	0.074	0.123	0.319	3TSW_A	N/A
9	pgenthreader.9	86.862	0.072	0.115	0.287	3TSZ_A	N/A
10	ffas.4	-0.814E+02	0.070	0.111	0.276	1VYV_A	2.30.30.40.27.2 3.40.50.300.104.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.