Pcons.net Protein Structure Prediction

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Saturday, April 27 2024

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Submission

23162 : EAL65515.2 DUF59 FAMILY PROTEIN [DICTYOSTELIUM DISCOIDEUM AX4]

Your submitted sequence: sequence (163 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.9	27.378	0.067	0.113	0.297	1DD9_A	3.90.980.10.1.1 3.40.1360.10.1.1 1.20.50.20.1.1
2	rpsblast.9	2.7	0.032	0.019	-0.035	1FLC_B	3.90.20.10.2.1
3	blast.5	17	0.022	0.014	-0.018	1J08_C	3.40.30.10.20.1 3.40.30.10.23.1
4	ffas.10	-0.676E+01	0.083	0.081	0.074	1TH5_A	N/A
5	ffas.2	-0.469E+02	0.153	0.203	0.402	1UWD_A	N/A
6	pgenthreader.3	39.510	0.155	0.218	0.468	1UWD_A	N/A
7	ffas.4	-0.109E+02	0.072	0.084	0.132	1VEH_A	N/A
8	rpsblast.2	1e-17	0.173	0.221	0.413	1WCJ_A	N/A
9	ffas.6	-0.105E+02	0.084	0.081	0.071	1XHJ_A	N/A
10	ffas.3	-0.462E+02	0.145	0.176	0.299	2CU6_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.