Pcons.net Protein Structure Prediction Meta Server Thursday, March 28 2024
Main Menu
Submission
Queue
About Pcons
About Pmodeller
About Pcons.net
Database status
Download




© Arne Elofsson

SciLifeLab Logotype nbis Logotype
SeRC Logotype Stockholm University logotype EGI logotype
23155 : TR|Q53459|Q53459_STAAU MFS TRANSPORTER OS=STAPHYLOCOCCUS AUREUS OX=1280 GN=NORA PE=4 SV=1

Your submitted sequence: sequence (388 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.1
-0.537E+020.1410.2460.668 1PV6_AN/A
2
ffas.4
-0.394E+020.1620.2630.668 1PW4_AN/A
3
pgenthreader.3
70.2710.1230.2080.550 1PW4_AN/A
4
rpsblast.4
2e-250.1230.2100.556 1PW4_AN/A
5
ffas.10
-0.488E+010.0220.0440.130 1TTW_A3.30.1460.10.4.1
6
blast.2
1.70.0150.0260.070 1Z4V_AN/A
7
pgenthreader.5
53.4720.0980.1750.481 2CFQ_AN/A
8
rpsblast.2
4e-380.1370.2460.682 2CFQ_AN/A
9
ffas.3
-0.450E+020.1220.2230.628 2GFP_AN/A
10
pgenthreader.2
75.5100.0990.1830.520 2GFP_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center