Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23154 : Jacques Archambault

Your submitted sequence: sequence (67 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser

PCONS (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.4	-0.445E+01	0.061	0.067	0.091	1DI2_A	3.30.160.20.1.1
2	ffas.2	-0.517E+01	0.071	0.061	0.019	3GWL_A	N/A
3	rpsblast.9	16	0.029	0.060	0.183	1WAK_A	3.30.200.20.9.1 1.10.510.10.23.1
4	ffas.9	-0.416E+01	0.052	0.059	0.088	1DY2_A	3.10.100.10.22.2
5	ffas.3	-0.470E+01	0.049	0.057	0.088	1DY0_A	3.10.100.10.22.1
6	rpsblast.8	14	0.064	0.056	0.026	2YYB_B	N/A
7	rpsblast.10	27	0.044	0.056	0.103	2OFG_X	N/A
8	rpsblast.4	9.3	0.043	0.055	0.105	3FK9_A	N/A
9	pgenthreader.1	23.326	0.064	0.055	0.018	1D7Q_A	2.40.50.140.74.1
10	rpsblast.3	9.0	0.027	0.054	0.163	1SH5_A	1.10.418.10.2.2 1.10.418.10.1.3

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.