Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23150 : TEAD1

Your submitted sequence: sequence (426 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser

PMODELLER (only used 41 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.8	38.622	0.026	0.047	0.131	1DJX_A	1.10.238.10.25.1 3.20.20.190.5.1 2.60.40.150.7.1
2	rpsblast.8	6e-04	0.025	0.023	0.017	1IRZ_A	1.10.10.60.42.1
3	pgenthreader.7	39.497	0.028	0.054	0.158	1TF4_A	1.50.10.10.3.4 2.60.40.710.1.2
4	ffas.12	-0.932E+01	0.022	0.031	0.065	1WGX_A	N/A
5	rpsblast.10	0.022	0.034	0.037	0.051	1WGX_A	N/A
6	ffas.7	-0.107E+02	0.023	0.027	0.044	2CJJ_A	N/A
7	ffas.8	-0.106E+02	0.022	0.026	0.042	2CQQ_A	N/A
8	rpsblast.9	0.009	0.036	0.038	0.048	2CQQ_A	N/A
9	ffas.10	-0.977E+01	0.022	0.033	0.077	2CQR_A	N/A
10	blast.9	7.2	0.003	0.000	-0.010	2HTA_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.