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© Arne Elofsson

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23149 : Antibody_HistaminH1

Your submitted sequence: sequence (27 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser

PMODELLER (only used 38 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.4
-0.334E+010.000-0.014-0.070 1D2J_A4.10.400.10.1.5
2
ffas.7
-0.320E+010.0000.0670.337 1D2L_A4.10.400.10.1.4
3
ffas.6
-0.326E+010.0000.0390.196 1J8E_A4.10.400.10.1.1
4
ffas.3
-0.347E+010.0000.0640.318 1JRF_A4.10.400.10.2.1
5
ffas.5
-0.329E+010.0000.0180.092 1K7B_A4.10.400.10.2.1
6
ffas.2
-0.353E+010.0000.0210.104 1LMR_AN/A
7
blast.5
300.0000.0440.222 1QNT_A2.30.37.60.1.1 1.10.10.10.7.2
8
ffas.9
-0.304E+010.000-0.017-0.085 1V9U_52.60.120.20.4.1
9
ffas.10
-0.299E+010.0000.0300.150 2LGP_AN/A
10
pgenthreader.10
19.9250.0000.0230.114 2MCD_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center