Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23145 : Plin 2

Your submitted sequence: sequence (437 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.11	-0.107E+02	0.030	0.042	0.089	1C1G_A	N/A
2	ffas.16	-0.101E+02	0.025	0.059	0.194	1EQ1_A	1.20.120.20.3.1
3	blast.3	3.9	0.013	0.011	0.005	1G2Q_A	3.40.50.2020.2.1
4	ffas.15	-0.104E+02	0.032	0.078	0.264	1HCI_A	1.20.58.60.8.1 1.20.58.60.7.1 1.20.58.60.5.1 1.20.58.60.6.1
5	ffas.12	-0.106E+02	0.026	0.037	0.080	1JCH_A	N/A
6	ffas.10	-0.107E+02	0.030	0.065	0.205	1QOY_A	1.20.1170.10.1.1
7	rpsblast.8	6.9	0.013	0.010	-0.004	1QZV_U	N/A
8	pgenthreader.8	22.392	0.030	0.071	0.237	1SJ8_A	1.20.1420.10.1.1
9	pgenthreader.9	22.392	0.011	0.027	0.093	1SJ8_A	1.20.1420.10.1.1
10	ffas.20	-0.949E+01	0.029	0.071	0.241	1ST6_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.