Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, May 8 2024

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Submission

23144 : id:23143:1-104

Your submitted sequence: sequence (104 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.723E+01	0.055	0.070	0.128	1IQO_A	3.30.160.120.1.1
2	pgenthreader.1	22.792	0.051	0.076	0.174	1IQO_A	3.30.160.120.1.1
3	ffas.3	-0.619E+01	0.043	0.060	0.130	1LSY_A	N/A
4	rpsblast.3	0.057	0.024	0.021	0.007	1QZV_U	N/A
5	ffas.6	-0.557E+01	0.042	0.013	-0.102	1S7D_A	2.40.128.20.20.1
6	pgenthreader.9	21.060	0.047	0.106	0.342	1TU5_A	3.10.450.40.8.1 3.10.450.40.11.1 2.70.98.20.4.1
7	blast.8	20	0.023	-0.011	-0.148	2FT0_A	N/A
8	blast.7	19	0.033	0.019	-0.035	2J0A_A	N/A
9	blast.2	1.6	0.030	0.016	-0.042	2MCQ_A	N/A
10	ffas.10	-0.532E+01	0.029	0.034	0.053	2NYS_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.