Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23140 : 5Y4O:A|PDBID|CHAIN|SEQUENCE

Your submitted sequence: sequence (80 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 19 models from 2 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.7	20	0.000	-0.006	-0.031	1DBO_A	2.160.20.10.15.1
2	blast.5	14	0.118	0.152	0.286	2K9P_A	N/A
3	blast.3	11	0.055	0.079	0.176	2KSW_A	N/A
4	rpsblast.7	8.4	0.030	0.036	0.060	2LKD_A	N/A
5	rpsblast.4	0.66	0.075	0.106	0.231	2LOM_A	N/A
6	rpsblast.3	0.39	0.065	0.136	0.422	2LON_A	N/A
7	rpsblast.1	6e-04	0.050	0.069	0.145	2PFF_B	N/A
8	rpsblast.6	4.8	0.004	-0.003	-0.033	2PFF_B	N/A
9	rpsblast.5	4.1	0.031	0.028	0.014	2W1K_A	N/A
10	blast.8	21	0.031	0.033	0.040	3EVN_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.