Pcons.net Protein Structure Prediction Meta Server Wednesday, September 18 2019
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© Arne Elofsson

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23138 : NP_001002824.1 MYOBLAST DETERMINATION PROTEIN 1 [SUS SCROFA]

Your submitted sequence: sequence (319 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 42 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.14
-0.127E+020.0500.0510.057 1A0A_A4.10.280.10.5.1
2
ffas.11
-0.140E+020.0620.0660.081 1AM9_A4.10.280.10.3.1
3
ffas.9
-0.152E+020.0650.0620.048 1AN2_A4.10.280.10.1.1
4
ffas.13
-0.131E+020.0420.0440.053 1AN4_A4.10.280.10.6.1
5
rpsblast.6
3e-160.0510.0440.015 1AN4_B4.10.280.10.6.1
6
ffas.7
-0.160E+020.0660.0670.069 1HLO_A4.10.280.10.1.1
7
rpsblast.5
1e-160.0700.0730.087 1HLO_A4.10.280.10.1.1
8
ffas.1
-0.264E+020.0690.0690.071 1MDY_A4.10.280.10.4.1
9
pgenthreader.1
64.0560.0900.0940.109 1MDY_A4.10.280.10.4.1
10
rpsblast.1
3e-190.0760.0750.070 1MDY_B4.10.280.10.4.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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