Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23135 :

Your submitted sequence: sequence (296 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 47 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.13	-0.714E+02	0.265	0.330	0.588	1GVE_A	3.20.20.100.2.1
2	ffas.20	-0.451E+02	0.233	0.320	0.667	1HW6_A	3.20.20.100.7.1
3	ffas.1	-0.816E+02	0.326	0.407	0.731	1LQA_A	3.20.20.100.5.1
4	pgenthreader.9	92.706	0.370	0.432	0.682	1LQA_A	3.20.20.100.5.1
5	ffas.19	-0.451E+02	0.249	0.331	0.658	1M9H_A	3.20.20.100.7.1
6	ffas.3	-0.804E+02	0.308	0.384	0.690	1PYF_A	3.20.20.100.4.1
7	pgenthreader.5	96.600	0.350	0.412	0.659	1PYF_A	3.20.20.100.4.1
8	rpsblast.1	2e-12	0.309	0.355	0.539	1PYF_A	3.20.20.100.4.1
9	ffas.5	-0.771E+02	0.315	0.375	0.617	1PZ1_A	3.20.20.100.4.2
10	pgenthreader.4	97.611	0.346	0.407	0.651	1PZ1_A	3.20.20.100.4.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.