Pcons.net Protein Structure Prediction

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Saturday, April 20 2024

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Submission

23132 : target2_intento2

Your submitted sequence: sequence (298 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 38 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.5	36.701	0.039	0.099	0.338	3VYP_A	N/A
2	pgenthreader.1	38.352	0.038	0.090	0.297	3VYN_A	N/A
3	pgenthreader.6	36.175	0.020	0.070	0.268	2E26_A	N/A
4	pgenthreader.2	37.328	0.019	0.070	0.272	2Q9O_A	N/A
5	ffas.1	-0.578E+02	0.033	0.066	0.197	3ZQD_A	N/A
6	ffas.2	-0.569E+02	0.030	0.063	0.195	1Y7M_A	N/A
7	ffas.3	-0.286E+02	0.029	0.061	0.189	1ZAT_A	N/A
8	ffas.6	-0.653E+01	0.023	0.055	0.185	2Q6L_A	N/A
9	pgenthreader.10	35.653	0.018	0.055	0.203	1YBI_A	2.80.10.50.2.1 2.80.10.50.4.1
10	pgenthreader.3	37.014	0.015	0.051	0.197	4BE3_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.