Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23131 : T1

Your submitted sequence: sequence (561 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.10	22.718	0.018	0.013	-0.009	1IZL_B	N/A
2	pgenthreader.2	16.772	0.009	0.034	0.136	1IZL_C	N/A
3	pgenthreader.3	16.772	0.000	0.006	0.029	1IZL_C	N/A
4	rpsblast.8	5.7	0.000	-0.001	-0.007	1VMD_B	3.40.50.1380.1.2
5	blast.8	11	0.000	0.002	0.010	1X3H_A	N/A
6	blast.4	1.4	0.004	0.011	0.037	1X64_A	N/A
7	ffas.3	-0.875E+01	0.019	0.118	0.516	2A65_A	N/A
8	ffas.9	-0.615E+01	0.009	0.046	0.195	2B5F_A	1.20.1080.10.2.1
9	pgenthreader.7	23.038	0.001	0.011	0.053	2BAF_A	N/A
10	blast.10	842	0.004	0.008	0.024	2GKS_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.