Pcons.net Protein Structure Prediction Meta Server Friday, March 29 2024
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© Arne Elofsson

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23130 : CD8

Your submitted sequence: sequence (220 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.16
-0.499E+020.2180.2330.292 1AIF_L2.60.40.10.4.4 2.60.40.10.2.1
2
ffas.2
-0.536E+020.2140.2230.258 1AKJ_D2.60.40.10.105.2
3
pgenthreader.8
49.9850.1790.1900.232 1F3R_B2.60.40.10.23.3 2.60.40.10.165.1
4
ffas.6
-0.508E+020.2180.2290.274 1KEN_L2.60.40.10.4.4 2.60.40.10.2.1
5
blast.4
2e-190.2330.2390.265 1NEZ_G2.60.40.10.105.1
6
ffas.7
-0.508E+020.2230.2300.257 1NEZ_G2.60.40.10.105.1
7
pgenthreader.2
63.7670.2400.2410.243 1NEZ_G2.60.40.10.105.1
8
ffas.13
-0.502E+020.2210.2380.305 1PKQ_A2.60.40.10.3.2 2.60.40.10.2.2
9
pgenthreader.4
51.0420.2070.2040.192 1QFW_M2.60.40.10.20.2
10
pgenthreader.9
49.8420.1890.2230.360 1ZGL_M2.60.40.10.69.2
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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