Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23123 : OoGST1

Your submitted sequence: sequence (250 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 47 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.15	-0.843E+02	0.410	0.448	0.598	1EV4_A	3.40.30.10.8.1 1.20.1050.10.1.1
2	ffas.18	-0.840E+02	0.409	0.451	0.620	1F3A_A	3.40.30.10.8.1 1.20.1050.10.1.1
3	ffas.8	-0.879E+02	0.484	0.511	0.617	1GSQ_A	N/A
4	ffas.20	-0.837E+02	0.396	0.430	0.568	1GUL_A	3.40.30.10.8.1 1.20.1050.10.1.3
5	blast.5	5e-28	0.456	0.466	0.507	1M0U_A	3.40.30.10.24.2 1.20.1050.10.6.1
6	ffas.6	-0.906E+02	0.510	0.535	0.637	1M0U_A	3.40.30.10.24.2 1.20.1050.10.6.1
7	pgenthreader.4	100.882	0.482	0.509	0.618	1M0U_A	3.40.30.10.24.2 1.20.1050.10.6.1
8	rpsblast.2	1e-28	0.429	0.452	0.543	1M0U_A	3.40.30.10.24.2 1.20.1050.10.6.1
9	ffas.14	-0.843E+02	0.408	0.447	0.604	1ML6_A	3.40.30.10.8.1 1.20.1050.10.1.1
10	ffas.13	-0.845E+02	0.455	0.486	0.608	1OE7_A	3.40.30.10.40.1 1.20.1050.10.7.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.