Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 23 2024

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Submission

23117 : 11

Your submitted sequence: sequence (401 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.112E+03	0.138	0.180	0.346	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
2	pgenthreader.1	85.000	0.138	0.169	0.294	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
3	rpsblast.2	4e-39	0.148	0.215	0.481	1BO1_B	3.30.800.10.1.1 3.30.810.10.1.1
4	pgenthreader.6	33.062	0.020	0.044	0.139	1IGY_B	2.60.40.10.6.4 2.60.40.10.8.1 2.60.40.10.29.2 2.60.40.10.18.2
5	rpsblast.10	6.9	0.018	0.017	0.014	1J1B_A	3.30.200.20.23.1 1.10.510.10.20.1
6	rpsblast.7	5.1	0.009	0.003	-0.020	1T44_G	3.40.20.10.3.1
7	blast.10	5.3	0.011	0.011	0.009	1ZEL_B	N/A
8	blast.4	2e-20	0.123	0.147	0.241	2GK9_A	3.30.800.10.1.1
9	ffas.2	-0.106E+03	0.120	0.149	0.266	2GK9_A	3.30.800.10.1.1
10	pgenthreader.3	63.102	0.109	0.139	0.258	2GK9_A	3.30.800.10.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.